18#ifndef itkAdvancedNormalizedCorrelationImageToImageMetric_h
19#define itkAdvancedNormalizedCorrelationImageToImageMetric_h
90template <
class TFixedImage,
class TMovingImage>
110 using typename Superclass::CoordinateRepresentationType;
111 using typename Superclass::MovingImageType;
112 using typename Superclass::MovingImagePixelType;
113 using typename Superclass::MovingImageConstPointer;
114 using typename Superclass::FixedImageType;
115 using typename Superclass::FixedImageConstPointer;
116 using typename Superclass::FixedImageRegionType;
117 using typename Superclass::TransformType;
118 using typename Superclass::TransformPointer;
119 using typename Superclass::InputPointType;
120 using typename Superclass::OutputPointType;
121 using typename Superclass::TransformParametersType;
122 using typename Superclass::TransformJacobianType;
123 using typename Superclass::NumberOfParametersType;
124 using typename Superclass::InterpolatorType;
125 using typename Superclass::InterpolatorPointer;
126 using typename Superclass::RealType;
127 using typename Superclass::GradientPixelType;
128 using typename Superclass::GradientImageType;
129 using typename Superclass::GradientImagePointer;
130 using typename Superclass::GradientImageFilterType;
131 using typename Superclass::GradientImageFilterPointer;
132 using typename Superclass::FixedImageMaskType;
133 using typename Superclass::FixedImageMaskPointer;
134 using typename Superclass::MovingImageMaskType;
135 using typename Superclass::MovingImageMaskPointer;
136 using typename Superclass::MeasureType;
137 using typename Superclass::DerivativeType;
138 using typename Superclass::DerivativeValueType;
139 using typename Superclass::ParametersType;
140 using typename Superclass::FixedImagePixelType;
141 using typename Superclass::MovingImageRegionType;
142 using typename Superclass::ImageSamplerType;
143 using typename Superclass::ImageSamplerPointer;
144 using typename Superclass::ImageSampleContainerType;
145 using typename Superclass::ImageSampleContainerPointer;
146 using typename Superclass::FixedImageLimiterType;
147 using typename Superclass::MovingImageLimiterType;
148 using typename Superclass::FixedImageLimiterOutputType;
149 using typename Superclass::MovingImageLimiterOutputType;
150 using typename Superclass::MovingImageDerivativeScalesType;
151 using typename Superclass::ThreaderType;
152 using typename Superclass::ThreadInfoType;
162 GetValue(
const TransformParametersType & parameters)
const override;
166 GetDerivative(
const TransformParametersType & parameters, DerivativeType & derivative)
const override;
172 DerivativeType & derivative)
const;
177 DerivativeType & derivative)
const override;
184 itkSetMacro(SubtractMean,
bool);
185 itkGetConstReferenceMacro(SubtractMean,
bool);
186 itkBooleanMacro(SubtractMean);
193 PrintSelf(std::ostream & os, Indent indent)
const override;
198 using typename Superclass::FixedImageIndexType;
199 using typename Superclass::FixedImageIndexValueType;
200 using typename Superclass::MovingImageIndexType;
201 using typename Superclass::FixedImagePointType;
202 using typename Superclass::MovingImagePointType;
203 using typename Superclass::MovingImageContinuousIndexType;
204 using typename Superclass::BSplineInterpolatorType;
205 using typename Superclass::CentralDifferenceGradientFilterType;
206 using typename Superclass::MovingImageDerivativeType;
207 using typename Superclass::NonZeroJacobianIndicesType;
214 const RealType & movingImageValue,
215 const DerivativeType & imageJacobian,
217 DerivativeType & derivativeF,
218 DerivativeType & derivativeM,
219 DerivativeType & differential)
const;
237 static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION
273 PaddedCorrelationGetValueAndDerivativePerThreadStruct);
275 PaddedCorrelationGetValueAndDerivativePerThreadStruct,
276 AlignedCorrelationGetValueAndDerivativePerThreadStruct);
277 mutable std::vector<AlignedCorrelationGetValueAndDerivativePerThreadStruct>
283#ifndef ITK_MANUAL_INSTANTIATION
284# include "itkAdvancedNormalizedCorrelationImageToImageMetric.hxx"
An extension of the ITK ImageToImageMetric. It is the intended base class for all elastix metrics.
ImageToImageMetric< TFixedImage, TMovingImage > Superclass
typename AdvancedTransformType::NonZeroJacobianIndicesType NonZeroJacobianIndicesType
typename DerivativeType::ValueType DerivativeValueType
SmartPointer< const Self > ConstPointer
Computes normalized correlation between two images, based on AdvancedImageToImageMetric....
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION AccumulateDerivativesThreaderCallback(void *arg)
~AdvancedNormalizedCorrelationImageToImageMetric() override=default
AdvancedNormalizedCorrelationImageToImageMetric()
itkAlignedTypedef(ITK_CACHE_LINE_ALIGNMENT, PaddedCorrelationGetValueAndDerivativePerThreadStruct, AlignedCorrelationGetValueAndDerivativePerThreadStruct)
itkStaticConstMacro(MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
MeasureType GetValue(const TransformParametersType ¶meters) const override
void ThreadedGetValueAndDerivative(ThreadIdType threadID) override
void GetDerivative(const TransformParametersType ¶meters, DerivativeType &derivative) const override
void UpdateDerivativeTerms(const RealType &fixedImageValue, const RealType &movingImageValue, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji, DerivativeType &derivativeF, DerivativeType &derivativeM, DerivativeType &differential) const
itkStaticConstMacro(FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
itkPadStruct(ITK_CACHE_LINE_ALIGNMENT, CorrelationGetValueAndDerivativePerThreadStruct, PaddedCorrelationGetValueAndDerivativePerThreadStruct)
void GetValueAndDerivativeSingleThreaded(const TransformParametersType ¶meters, MeasureType &value, DerivativeType &derivative) const
void GetValueAndDerivative(const TransformParametersType ¶meters, MeasureType &value, DerivativeType &derivative) const override
void PrintSelf(std::ostream &os, Indent indent) const override
void InitializeThreadingParameters() const override
ITK_DISALLOW_COPY_AND_MOVE(AdvancedNormalizedCorrelationImageToImageMetric)
typename NumericTraits< MeasureType >::AccumulateType AccumulateType
void AfterThreadedGetValueAndDerivative(MeasureType &value, DerivativeType &derivative) const override
std::vector< AlignedCorrelationGetValueAndDerivativePerThreadStruct > m_CorrelationGetValueAndDerivativePerThreadVariables
DerivativeType st_DerivativeM
SizeValueType st_NumberOfPixelsCounted
DerivativeType st_DerivativeF
DerivativeType st_Differential
AdvancedNormalizedCorrelationImageToImageMetric * st_Metric
DerivativeValueType * st_DerivativePointer
RealType st_InvertedDenominator
AccumulateType st_sfm_smm